Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
LRCH4O75427 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LRCH4O75427 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH4O75427 AC090340.1-201ENST00000620778 4980 ntBASIC18.26■□□□□ 0.51
LRCH4O75427 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.26■□□□□ 0.51
LRCH4O75427 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.26■□□□□ 0.51
LRCH4O75427 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.26■□□□□ 0.51
LRCH4O75427 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.26■□□□□ 0.51
LRCH4O75427 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH4O75427 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRCH4O75427 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH4O75427 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.26■□□□□ 0.51
LRCH4O75427 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRCH4O75427 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH4O75427 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 INTS4P1-201ENST00000438455 1935 ntBASIC18.25■□□□□ 0.51
LRCH4O75427 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH4O75427 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH4O75427 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LRCH4O75427 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LRCH4O75427 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LRCH4O75427 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LRCH4O75427 MINOS1P3-201ENST00000457048 203 ntBASIC18.25■□□□□ 0.51
LRCH4O75427 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.25■□□□□ 0.51
LRCH4O75427 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.25■□□□□ 0.51
LRCH4O75427 AC074051.2-201ENST00000565115 352 ntBASIC18.25■□□□□ 0.51
LRCH4O75427 AC111152.3-201ENST00000569699 673 ntBASIC18.25■□□□□ 0.51
LRCH4O75427 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
LRCH4O75427 STK25P1-201ENST00000585406 838 ntBASIC18.25■□□□□ 0.51
LRCH4O75427 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH4O75427 AC092119.3-201ENST00000612618 583 ntBASIC18.25■□□□□ 0.51
LRCH4O75427 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH4O75427 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH4O75427 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH4O75427 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH4O75427 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRCH4O75427 AC046185.3-201ENST00000623228 1824 ntBASIC18.25■□□□□ 0.51
LRCH4O75427 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH4O75427 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.25■□□□□ 0.51
LRCH4O75427 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH4O75427 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LRCH4O75427 AC022211.2-201ENST00000585075 2527 ntBASIC18.24■□□□□ 0.51
LRCH4O75427 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.24■□□□□ 0.51
LRCH4O75427 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.24■□□□□ 0.51
LRCH4O75427 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRCH4O75427 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.24■□□□□ 0.51
LRCH4O75427 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRCH4O75427 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.24■□□□□ 0.51
LRCH4O75427 SLC25A1P3-201ENST00000395415 828 ntBASIC18.24■□□□□ 0.51
LRCH4O75427 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.24■□□□□ 0.51
LRCH4O75427 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.24■□□□□ 0.51
LRCH4O75427 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
LRCH4O75427 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.24■□□□□ 0.51
LRCH4O75427 AC096582.2-201ENST00000510860 516 ntBASIC18.24■□□□□ 0.51
LRCH4O75427 AP000867.3-201ENST00000524675 377 ntBASIC18.24■□□□□ 0.51
LRCH4O75427 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.24■□□□□ 0.51
LRCH4O75427 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRCH4O75427 AD001527.2-201ENST00000622994 785 ntBASIC18.24■□□□□ 0.51
LRCH4O75427 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRCH4O75427 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms