Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH7O60245 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDH7O60245 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH7O60245 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDH7O60245 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDH7O60245 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDH7O60245 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH7O60245 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH7O60245 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PCDH7O60245 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDH7O60245 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.78■□□□□ 0.28
PCDH7O60245 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH7O60245 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH7O60245 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH7O60245 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH7O60245 AC007967.3-201ENST00000434308 558 ntBASIC16.78■□□□□ 0.28
PCDH7O60245 AC002558.1-201ENST00000488906 803 ntBASIC16.78■□□□□ 0.28
PCDH7O60245 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDH7O60245 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH7O60245 AC011840.4-201ENST00000578471 627 ntBASIC16.78■□□□□ 0.28
PCDH7O60245 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH7O60245 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH7O60245 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH7O60245 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 AP001094.4-201ENST00000579008 2176 ntBASIC16.78■□□□□ 0.28
PCDH7O60245 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH7O60245 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDH7O60245 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH7O60245 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH7O60245 AC005332.1-201ENST00000577698 1310 ntBASIC16.77■□□□□ 0.28
PCDH7O60245 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH7O60245 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
PCDH7O60245 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PCDH7O60245 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDH7O60245 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH7O60245 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 AL845331.1-201ENST00000424978 1190 ntBASIC16.77■□□□□ 0.28
PCDH7O60245 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH7O60245 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH7O60245 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH7O60245 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH7O60245 AL353801.3-201ENST00000609898 542 ntBASIC16.77■□□□□ 0.28
PCDH7O60245 AL139327.4-201ENST00000612362 153 ntBASIC16.77■□□□□ 0.28
PCDH7O60245 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH7O60245 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH7O60245 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
PCDH7O60245 AC125634.1-201ENST00000438758 1403 ntBASIC16.77■□□□□ 0.27
PCDH7O60245 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDH7O60245 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH7O60245 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDH7O60245 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDH7O60245 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH7O60245 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH7O60245 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH7O60245 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH7O60245 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDH7O60245 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH7O60245 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH7O60245 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms