Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 AC068587.6-202ENST00000641839 5619 ntBASIC12.04□□□□□ -0.48
NDUFA1O15239 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.04□□□□□ -0.48
NDUFA1O15239 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.04□□□□□ -0.48
NDUFA1O15239 GCSHP5-201ENST00000443090 522 ntBASIC12.04□□□□□ -0.48
NDUFA1O15239 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.04□□□□□ -0.48
NDUFA1O15239 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.04□□□□□ -0.48
NDUFA1O15239 AP003071.4-201ENST00000562276 1284 ntBASIC12.04□□□□□ -0.48
NDUFA1O15239 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 AC100803.2-201ENST00000562459 1963 ntBASIC12.04□□□□□ -0.48
NDUFA1O15239 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 FLJ38576-201ENST00000623820 2459 ntBASIC12.04□□□□□ -0.48
NDUFA1O15239 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 AC022898.2-201ENST00000616822 1312 ntBASIC12.04□□□□□ -0.48
NDUFA1O15239 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 AC008894.3-201ENST00000624324 3103 ntBASIC12.03□□□□□ -0.48
NDUFA1O15239 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.03□□□□□ -0.48
NDUFA1O15239 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.03□□□□□ -0.48
NDUFA1O15239 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 AP003041.3-201ENST00000527151 707 ntBASIC12.03□□□□□ -0.48
NDUFA1O15239 BX088651.1-201ENST00000540551 451 ntBASIC12.03□□□□□ -0.48
NDUFA1O15239 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.03□□□□□ -0.48
NDUFA1O15239 C2orf69P3-201ENST00000565542 1120 ntBASIC12.03□□□□□ -0.48
NDUFA1O15239 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 WWOX-216ENST00000569818 525 ntBASIC12.03□□□□□ -0.48
NDUFA1O15239 MIR4674-201ENST00000582457 87 ntBASIC12.03□□□□□ -0.48
NDUFA1O15239 MIR4785-201ENST00000585005 73 ntBASIC12.03□□□□□ -0.48
NDUFA1O15239 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.03□□□□□ -0.48
NDUFA1O15239 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 AC116562.4-202ENST00000641738 218 ntBASIC12.03□□□□□ -0.48
NDUFA1O15239 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFA1O15239 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFA1O15239 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFA1O15239 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NDUFA1O15239 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFA1O15239 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
NDUFA1O15239 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.02□□□□□ -0.48
NDUFA1O15239 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFA1O15239 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.48
NDUFA1O15239 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFA1O15239 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFA1O15239 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.02□□□□□ -0.48
NDUFA1O15239 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFA1O15239 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
NDUFA1O15239 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.02□□□□□ -0.48
NDUFA1O15239 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFA1O15239 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
NDUFA1O15239 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFA1O15239 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms