Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNMT3AQ9Y6K1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 LINC00304-203ENST00000565008 1864 ntBASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 STK19B-204ENST00000512515 211 ntBASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 AC064862.7-201ENST00000604520 867 ntBASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 AL031008.1-201ENST00000619963 541 ntBASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 AC132938.5-201ENST00000624980 1813 ntBASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 AC133963.1-201ENST00000504166 1679 ntBASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.23■□□□□ 0.35
DNMT3AQ9Y6K1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 SPDYE21P-201ENST00000413323 827 ntBASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNMT3AQ9Y6K1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 AC090340.1-201ENST00000620778 4980 ntBASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 KLF4P1-201ENST00000412782 1185 ntBASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 AC079781.3-201ENST00000449110 356 ntBASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 SIGLEC30P-201ENST00000455569 941 ntBASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNMT3AQ9Y6K1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
DNMT3AQ9Y6K1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DNMT3AQ9Y6K1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 GNAS-203ENST00000306120 1878 ntBASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms