Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 AC005332.3-201ENST00000589904 676 ntBASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 AC120114.3-201ENST00000611923 658 ntBASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 IGHV3-41-201ENST00000613121 348 ntBASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 AC233702.3-201ENST00000578656 1387 ntBASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 AP003733.1-201ENST00000491725 852 ntBASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 AC113404.2-201ENST00000507884 177 ntBASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 AC099336.1-202ENST00000602961 463 ntBASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 AL390719.2-201ENST00000606993 987 ntBASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA4Q9Y5G9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 Z97985.1-201ENST00000332270 946 ntBASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 Z69720.1-201ENST00000601483 472 ntBASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA4Q9Y5G9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms