Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 AL138688.1-201ENST00000624851 1594 ntBASIC16.51■□□□□ 0.23
IFT52Q9Y366 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT52Q9Y366 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IFT52Q9Y366 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 AC068418.2-201ENST00000577309 3703 ntBASIC16.5■□□□□ 0.23
IFT52Q9Y366 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 HLA-J-201ENST00000462773 1622 ntBASIC16.5■□□□□ 0.23
IFT52Q9Y366 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 TERF1P1-201ENST00000311003 1181 ntBASIC16.5■□□□□ 0.23
IFT52Q9Y366 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 TSPY12P-201ENST00000421279 868 ntBASIC16.5■□□□□ 0.23
IFT52Q9Y366 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 YBX1P2-201ENST00000489612 999 ntBASIC16.5■□□□□ 0.23
IFT52Q9Y366 AC139887.4-201ENST00000607877 719 ntBASIC16.5■□□□□ 0.23
IFT52Q9Y366 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
IFT52Q9Y366 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT52Q9Y366 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 SPDYE15P-201ENST00000424157 909 ntBASIC16.49■□□□□ 0.23
IFT52Q9Y366 HOMER2P1-201ENST00000455653 964 ntBASIC16.49■□□□□ 0.23
IFT52Q9Y366 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT52Q9Y366 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.49■□□□□ 0.23
IFT52Q9Y366 AC004263.2-201ENST00000617183 678 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms