Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 GPR32P1-201ENST00000601788 811 ntBASIC14.24□□□□□ -0.13
FOXA2Q9Y261 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 AC009154.2-201ENST00000621177 724 ntBASIC14.24□□□□□ -0.13
FOXA2Q9Y261 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 OR6D1P-203ENST00000641209 4860 ntBASIC14.24□□□□□ -0.13
FOXA2Q9Y261 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
FOXA2Q9Y261 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 AC005332.1-201ENST00000577698 1310 ntBASIC14.23□□□□□ -0.13
FOXA2Q9Y261 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 IGHGP-201ENST00000390555 1178 ntBASIC14.23□□□□□ -0.13
FOXA2Q9Y261 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.23□□□□□ -0.13
FOXA2Q9Y261 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 BX276092.7-203ENST00000637198 1536 ntBASIC14.23□□□□□ -0.13
FOXA2Q9Y261 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 AC016396.2-201ENST00000562575 1417 ntBASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXA2Q9Y261 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 AC022211.2-201ENST00000585075 2527 ntBASIC14.22□□□□□ -0.13
FOXA2Q9Y261 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXA2Q9Y261 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms