Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 AC009065.1-201ENST00000564055 1225 ntBASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 AC036111.1-201ENST00000533973 1582 ntBASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40AQ8WXH6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 GCSHP2-201ENST00000560971 527 ntBASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 LINC01451-201ENST00000623792 534 ntBASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40AQ8WXH6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms