Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 AC009477.1-201ENST00000452936 217 ntBASIC15.09■□□□□ 0.01
LRRK2Q5S007 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 MIR6080-201ENST00000617359 66 ntBASIC15.09■□□□□ 0.01
LRRK2Q5S007 AC009336.1-201ENST00000608941 1553 ntBASIC15.09■□□□□ 0.01
LRRK2Q5S007 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRK2Q5S007 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRK2Q5S007 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.08■□□□□ 0.01
LRRK2Q5S007 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRK2Q5S007 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LRRK2Q5S007 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.08■□□□□ 0.01
LRRK2Q5S007 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRK2Q5S007 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.08■□□□□ 0.01
LRRK2Q5S007 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRK2Q5S007 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.08■□□□□ 0
LRRK2Q5S007 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 AC093484.2-201ENST00000580996 2166 ntBASIC15.08■□□□□ 0
LRRK2Q5S007 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
LRRK2Q5S007 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.08■□□□□ 0
LRRK2Q5S007 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.08■□□□□ 0
LRRK2Q5S007 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.08■□□□□ 0
LRRK2Q5S007 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.08■□□□□ 0
LRRK2Q5S007 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRRK2Q5S007 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LRRK2Q5S007 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRK2Q5S007 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.08■□□□□ 0
LRRK2Q5S007 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.07■□□□□ 0
LRRK2Q5S007 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LRRK2Q5S007 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.07■□□□□ 0
LRRK2Q5S007 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.07■□□□□ 0
LRRK2Q5S007 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 ACTG1P4-201ENST00000425123 1122 ntBASIC15.07■□□□□ 0
LRRK2Q5S007 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LRRK2Q5S007 AC104794.3-201ENST00000566840 1248 ntBASIC15.07■□□□□ 0
LRRK2Q5S007 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LRRK2Q5S007 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.07■□□□□ 0
LRRK2Q5S007 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.07■□□□□ 0
LRRK2Q5S007 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.07■□□□□ 0
LRRK2Q5S007 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LRRK2Q5S007 AC092933.1-201ENST00000393644 945 ntBASIC15.07■□□□□ 0
LRRK2Q5S007 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.07■□□□□ 0
LRRK2Q5S007 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.07■□□□□ 0
LRRK2Q5S007 AC099568.2-201ENST00000609194 695 ntBASIC15.07■□□□□ 0
LRRK2Q5S007 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.07■□□□□ 0
LRRK2Q5S007 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.07■□□□□ 0
LRRK2Q5S007 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.07■□□□□ 0
LRRK2Q5S007 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.07■□□□□ 0
LRRK2Q5S007 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.07■□□□□ 0
LRRK2Q5S007 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRRK2Q5S007 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.07■□□□□ 0
LRRK2Q5S007 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
LRRK2Q5S007 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRK2Q5S007 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRRK2Q5S007 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRK2Q5S007 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRK2Q5S007 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRRK2Q5S007 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.06■□□□□ 0
LRRK2Q5S007 ALG1L8P-201ENST00000533887 760 ntBASIC15.06■□□□□ 0
LRRK2Q5S007 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.06■□□□□ 0
LRRK2Q5S007 AL590560.3-201ENST00000623350 461 ntBASIC15.06■□□□□ 0
LRRK2Q5S007 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.06■□□□□ 0
LRRK2Q5S007 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms