Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBA52P62987 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
UBA52P62987 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
UBA52P62987 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBA52P62987 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBA52P62987 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.23■□□□□ 0.03
UBA52P62987 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
UBA52P62987 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.23■□□□□ 0.03
UBA52P62987 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UBA52P62987 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.22■□□□□ 0.03
UBA52P62987 PCDHB19P-201ENST00000570871 2371 ntBASIC15.22■□□□□ 0.03
UBA52P62987 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 PCDH8P1-201ENST00000428983 2773 ntBASIC15.22■□□□□ 0.03
UBA52P62987 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.22■□□□□ 0.03
UBA52P62987 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
UBA52P62987 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.22■□□□□ 0.03
UBA52P62987 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.22■□□□□ 0.03
UBA52P62987 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
UBA52P62987 SPDYE15P-201ENST00000424157 909 ntBASIC15.22■□□□□ 0.03
UBA52P62987 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 ATP5G2P1-201ENST00000433580 426 ntBASIC15.22■□□□□ 0.03
UBA52P62987 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.22■□□□□ 0.03
UBA52P62987 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.22■□□□□ 0.03
UBA52P62987 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.22■□□□□ 0.03
UBA52P62987 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.22■□□□□ 0.03
UBA52P62987 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.22■□□□□ 0.03
UBA52P62987 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UBA52P62987 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.22■□□□□ 0.03
UBA52P62987 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.22■□□□□ 0.03
UBA52P62987 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBA52P62987 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.21■□□□□ 0.03
UBA52P62987 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.21■□□□□ 0.03
UBA52P62987 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.21■□□□□ 0.03
UBA52P62987 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UBA52P62987 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UBA52P62987 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.21■□□□□ 0.03
UBA52P62987 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.21■□□□□ 0.03
UBA52P62987 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.21■□□□□ 0.03
UBA52P62987 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.21■□□□□ 0.03
UBA52P62987 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA52P62987 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA52P62987 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.21■□□□□ 0.03
UBA52P62987 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA52P62987 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.21■□□□□ 0.03
UBA52P62987 AC012313.10-201ENST00000623509 926 ntBASIC15.21■□□□□ 0.03
UBA52P62987 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA52P62987 UBALD1-205ENST00000590891 2641 ntBASIC15.21■□□□□ 0.03
UBA52P62987 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
UBA52P62987 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
UBA52P62987 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBA52P62987 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBA52P62987 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBA52P62987 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBA52P62987 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
UBA52P62987 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.2■□□□□ 0.02
UBA52P62987 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA52P62987 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
UBA52P62987 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA52P62987 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA52P62987 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms