Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASP4P49662 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CASP4P49662 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASP4P49662 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.17■□□□□ 0.66
CASP4P49662 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASP4P49662 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.17■□□□□ 0.66
CASP4P49662 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.17■□□□□ 0.66
CASP4P49662 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASP4P49662 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASP4P49662 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.17■□□□□ 0.66
CASP4P49662 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CASP4P49662 INTS4P1-201ENST00000438455 1935 ntBASIC19.17■□□□□ 0.66
CASP4P49662 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASP4P49662 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CASP4P49662 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.16■□□□□ 0.66
CASP4P49662 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CASP4P49662 AL023806.1-201ENST00000603994 1649 ntBASIC19.16■□□□□ 0.66
CASP4P49662 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.16■□□□□ 0.66
CASP4P49662 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CASP4P49662 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.16■□□□□ 0.66
CASP4P49662 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.16■□□□□ 0.66
CASP4P49662 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CASP4P49662 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 AC138894.3-201ENST00000603787 634 ntBASIC19.16■□□□□ 0.66
CASP4P49662 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.16■□□□□ 0.66
CASP4P49662 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.16■□□□□ 0.66
CASP4P49662 AC012313.10-201ENST00000623509 926 ntBASIC19.16■□□□□ 0.66
CASP4P49662 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CASP4P49662 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CASP4P49662 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASP4P49662 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CASP4P49662 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.15■□□□□ 0.66
CASP4P49662 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.15■□□□□ 0.66
CASP4P49662 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.15■□□□□ 0.66
CASP4P49662 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CASP4P49662 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.15■□□□□ 0.66
CASP4P49662 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CASP4P49662 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.15■□□□□ 0.66
CASP4P49662 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.15■□□□□ 0.66
CASP4P49662 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.15■□□□□ 0.66
CASP4P49662 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.15■□□□□ 0.66
CASP4P49662 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CASP4P49662 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CASP4P49662 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.15■□□□□ 0.66
CASP4P49662 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CASP4P49662 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.15■□□□□ 0.66
CASP4P49662 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASP4P49662 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CASP4P49662 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CASP4P49662 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CASP4P49662 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
CASP4P49662 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.14■□□□□ 0.65
CASP4P49662 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CASP4P49662 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.14■□□□□ 0.65
CASP4P49662 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.14■□□□□ 0.65
CASP4P49662 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 NUS1P2-201ENST00000417358 873 ntBASIC19.14■□□□□ 0.65
CASP4P49662 AC103564.2-201ENST00000432853 1299 ntBASIC19.14■□□□□ 0.65
CASP4P49662 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CASP4P49662 FOSL1P1-201ENST00000511041 816 ntBASIC19.14■□□□□ 0.65
CASP4P49662 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.14■□□□□ 0.65
CASP4P49662 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.14■□□□□ 0.65
CASP4P49662 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CASP4P49662 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CASP4P49662 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CASP4P49662 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CASP4P49662 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms