Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC046185.3-201ENST00000623228 1824 ntBASIC16.96■□□□□ 0.3
SLC6A12P48065 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC6A12P48065 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SLC6A12P48065 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.96■□□□□ 0.3
SLC6A12P48065 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC6A12P48065 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC6A12P48065 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A12P48065 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC6A12P48065 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC6A12P48065 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A12P48065 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SLC6A12P48065 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 RCN1P2-201ENST00000398357 915 ntBASIC16.95■□□□□ 0.3
SLC6A12P48065 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC6A12P48065 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC6A12P48065 AC096582.2-201ENST00000510860 516 ntBASIC16.95■□□□□ 0.3
SLC6A12P48065 AP000867.3-201ENST00000524675 377 ntBASIC16.95■□□□□ 0.3
SLC6A12P48065 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC6A12P48065 AC012615.1-201ENST00000565797 1299 ntBASIC16.95■□□□□ 0.3
SLC6A12P48065 AC092329.2-201ENST00000598402 547 ntBASIC16.95■□□□□ 0.3
SLC6A12P48065 AC114341.1-201ENST00000618070 349 ntBASIC16.95■□□□□ 0.3
SLC6A12P48065 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC6A12P48065 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC6A12P48065 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A12P48065 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC6A12P48065 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
SLC6A12P48065 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC6A12P48065 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC6A12P48065 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC6A12P48065 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 AC080080.1-201ENST00000625121 2420 ntBASIC16.94■□□□□ 0.3
SLC6A12P48065 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SLC6A12P48065 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 AC104819.1-201ENST00000504587 486 ntBASIC16.94■□□□□ 0.3
SLC6A12P48065 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.94■□□□□ 0.3
SLC6A12P48065 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SLC6A12P48065 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC6A12P48065 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLC6A12P48065 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC6A12P48065 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC6A12P48065 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC6A12P48065 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A12P48065 AC132938.5-201ENST00000624980 1813 ntBASIC16.93■□□□□ 0.3
SLC6A12P48065 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 BCL2-203ENST00000589955 5011 ntBASIC16.93■□□□□ 0.3
SLC6A12P48065 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
SLC6A12P48065 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC6A12P48065 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC6A12P48065 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC6A12P48065 POM121L3P-201ENST00000419331 1163 ntBASIC16.93■□□□□ 0.3
SLC6A12P48065 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC6A12P48065 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC6A12P48065 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC6A12P48065 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC6A12P48065 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC6A12P48065 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC6A12P48065 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC6A12P48065 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC6A12P48065 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC6A12P48065 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC6A12P48065 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A12P48065 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms