Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BRCC3P46736 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.67■□□□□ 0.58
BRCC3P46736 AC108751.1-201ENST00000490852 363 ntBASIC18.67■□□□□ 0.58
BRCC3P46736 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 PGM5P2-202ENST00000637225 1043 ntBASIC18.67■□□□□ 0.58
BRCC3P46736 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
BRCC3P46736 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BRCC3P46736 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRCC3P46736 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.67■□□□□ 0.58
BRCC3P46736 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
BRCC3P46736 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BRCC3P46736 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.66■□□□□ 0.58
BRCC3P46736 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.66■□□□□ 0.58
BRCC3P46736 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
BRCC3P46736 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.66■□□□□ 0.58
BRCC3P46736 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
BRCC3P46736 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.66■□□□□ 0.58
BRCC3P46736 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.66■□□□□ 0.58
BRCC3P46736 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.66■□□□□ 0.58
BRCC3P46736 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.66■□□□□ 0.58
BRCC3P46736 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.66■□□□□ 0.58
BRCC3P46736 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.66■□□□□ 0.58
BRCC3P46736 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.66■□□□□ 0.58
BRCC3P46736 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCC3P46736 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCC3P46736 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCC3P46736 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
BRCC3P46736 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BRCC3P46736 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCC3P46736 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCC3P46736 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.65■□□□□ 0.58
BRCC3P46736 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.65■□□□□ 0.58
BRCC3P46736 AL591424.1-201ENST00000442569 1213 ntBASIC18.65■□□□□ 0.58
BRCC3P46736 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.65■□□□□ 0.58
BRCC3P46736 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.65■□□□□ 0.58
BRCC3P46736 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCC3P46736 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.65■□□□□ 0.58
BRCC3P46736 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCC3P46736 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCC3P46736 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCC3P46736 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.64■□□□□ 0.58
BRCC3P46736 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.64■□□□□ 0.58
BRCC3P46736 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BRCC3P46736 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BRCC3P46736 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
BRCC3P46736 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 AC012317.2-201ENST00000623305 2251 ntBASIC18.64■□□□□ 0.57
BRCC3P46736 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BRCC3P46736 MYCLP1-201ENST00000372451 1075 ntBASIC18.64■□□□□ 0.57
BRCC3P46736 BX842568.4-201ENST00000421222 227 ntBASIC18.64■□□□□ 0.57
BRCC3P46736 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.64■□□□□ 0.57
BRCC3P46736 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms