Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CTNNA1P35221 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTNNA1P35221 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
CTNNA1P35221 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.59■□□□□ 0.57
CTNNA1P35221 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTNNA1P35221 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.59■□□□□ 0.57
CTNNA1P35221 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.59■□□□□ 0.57
CTNNA1P35221 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.59■□□□□ 0.57
CTNNA1P35221 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.59■□□□□ 0.57
CTNNA1P35221 KRT18P48-201ENST00000434763 852 ntBASIC18.59■□□□□ 0.57
CTNNA1P35221 AC140113.3-201ENST00000605663 199 ntBASIC18.59■□□□□ 0.57
CTNNA1P35221 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTNNA1P35221 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CTNNA1P35221 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.59■□□□□ 0.57
CTNNA1P35221 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CTNNA1P35221 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNNA1P35221 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CTNNA1P35221 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.58■□□□□ 0.57
CTNNA1P35221 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTNNA1P35221 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.58■□□□□ 0.57
CTNNA1P35221 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTNNA1P35221 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.58■□□□□ 0.57
CTNNA1P35221 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CTNNA1P35221 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNNA1P35221 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNNA1P35221 COX11P1-201ENST00000489116 835 ntBASIC18.58■□□□□ 0.56
CTNNA1P35221 AC112698.1-201ENST00000510299 916 ntBASIC18.58■□□□□ 0.56
CTNNA1P35221 AC093827.2-201ENST00000512654 315 ntBASIC18.58■□□□□ 0.56
CTNNA1P35221 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTNNA1P35221 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNNA1P35221 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNNA1P35221 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CTNNA1P35221 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.58■□□□□ 0.56
CTNNA1P35221 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNNA1P35221 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CTNNA1P35221 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNNA1P35221 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CTNNA1P35221 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.57■□□□□ 0.56
CTNNA1P35221 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CTNNA1P35221 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.57■□□□□ 0.56
CTNNA1P35221 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.57■□□□□ 0.56
CTNNA1P35221 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTNNA1P35221 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CTNNA1P35221 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 STARP1-201ENST00000397973 869 ntBASIC18.57■□□□□ 0.56
CTNNA1P35221 AC005104.2-201ENST00000427818 678 ntBASIC18.57■□□□□ 0.56
CTNNA1P35221 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.57■□□□□ 0.56
CTNNA1P35221 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.57■□□□□ 0.56
CTNNA1P35221 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.57■□□□□ 0.56
CTNNA1P35221 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.57■□□□□ 0.56
CTNNA1P35221 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.57■□□□□ 0.56
CTNNA1P35221 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.57■□□□□ 0.56
CTNNA1P35221 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.57■□□□□ 0.56
CTNNA1P35221 BX276092.7-203ENST00000637198 1536 ntBASIC18.57■□□□□ 0.56
CTNNA1P35221 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTNNA1P35221 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNNA1P35221 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CTNNA1P35221 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTNNA1P35221 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNNA1P35221 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNNA1P35221 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTNNA1P35221 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.56■□□□□ 0.56
CTNNA1P35221 TSPY12P-201ENST00000421279 868 ntBASIC18.56■□□□□ 0.56
CTNNA1P35221 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNNA1P35221 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CTNNA1P35221 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNNA1P35221 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms