Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP2B4P23634 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B4P23634 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2B4P23634 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP2B4P23634 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP2B4P23634 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP2B4P23634 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2B4P23634 AC091812.2-201ENST00000619081 385 ntBASIC21.19■□□□□ 0.98
ATP2B4P23634 AC046185.3-201ENST00000623228 1824 ntBASIC21.19■□□□□ 0.98
ATP2B4P23634 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP2B4P23634 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B4P23634 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP2B4P23634 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP2B4P23634 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B4P23634 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2B4P23634 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ATP2B4P23634 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B4P23634 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP2B4P23634 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B4P23634 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B4P23634 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP2B4P23634 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B4P23634 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B4P23634 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B4P23634 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B4P23634 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B4P23634 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ATP2B4P23634 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.18■□□□□ 0.98
ATP2B4P23634 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B4P23634 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATP2B4P23634 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP2B4P23634 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
ATP2B4P23634 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B4P23634 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B4P23634 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATP2B4P23634 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B4P23634 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B4P23634 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B4P23634 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B4P23634 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B4P23634 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATP2B4P23634 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B4P23634 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B4P23634 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B4P23634 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B4P23634 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
ATP2B4P23634 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
ATP2B4P23634 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP2B4P23634 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP2B4P23634 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.17■□□□□ 0.98
ATP2B4P23634 PAWRP1-201ENST00000451083 565 ntBASIC21.17■□□□□ 0.98
ATP2B4P23634 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATP2B4P23634 AP000344.2-201ENST00000512987 629 ntBASIC21.17■□□□□ 0.98
ATP2B4P23634 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP2B4P23634 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP2B4P23634 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
ATP2B4P23634 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ATP2B4P23634 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2B4P23634 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2B4P23634 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2B4P23634 REXO1L11P-201ENST00000620964 1927 ntBASIC21.17■□□□□ 0.98
ATP2B4P23634 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B4P23634 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP2B4P23634 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP2B4P23634 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B4P23634 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATP2B4P23634 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B4P23634 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B4P23634 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP2B4P23634 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ATP2B4P23634 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B4P23634 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2B4P23634 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B4P23634 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B4P23634 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP2B4P23634 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2B4P23634 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
ATP2B4P23634 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP2B4P23634 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
ATP2B4P23634 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ATP2B4P23634 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2B4P23634 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2B4P23634 AC027612.4-201ENST00000605371 583 ntBASIC21.16■□□□□ 0.98
ATP2B4P23634 AC068137.2-201ENST00000605408 478 ntBASIC21.16■□□□□ 0.98
ATP2B4P23634 LINC02084-201ENST00000606069 1096 ntBASIC21.16■□□□□ 0.98
ATP2B4P23634 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP2B4P23634 AC092902.6-201ENST00000641783 218 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms