Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RARAP10276 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.46■□□□□ 0.55
RARAP10276 AL121761.2-201ENST00000598007 1648 ntBASIC18.46■□□□□ 0.55
RARAP10276 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.46■□□□□ 0.55
RARAP10276 AC096633.1-201ENST00000422446 749 ntBASIC18.46■□□□□ 0.55
RARAP10276 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.46■□□□□ 0.55
RARAP10276 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.46■□□□□ 0.55
RARAP10276 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.46■□□□□ 0.55
RARAP10276 FAM86EP-206ENST00000510506 987 ntBASIC18.46■□□□□ 0.55
RARAP10276 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.46■□□□□ 0.55
RARAP10276 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.46■□□□□ 0.55
RARAP10276 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.46■□□□□ 0.55
RARAP10276 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.46■□□□□ 0.55
RARAP10276 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.46■□□□□ 0.55
RARAP10276 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RARAP10276 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RARAP10276 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RARAP10276 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 BX276092.7-203ENST00000637198 1536 ntBASIC18.45■□□□□ 0.54
RARAP10276 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RARAP10276 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.45■□□□□ 0.54
RARAP10276 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.45■□□□□ 0.54
RARAP10276 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.45■□□□□ 0.54
RARAP10276 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RARAP10276 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RARAP10276 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.45■□□□□ 0.54
RARAP10276 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.45■□□□□ 0.54
RARAP10276 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.45■□□□□ 0.54
RARAP10276 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.45■□□□□ 0.54
RARAP10276 AL592071.1-201ENST00000611956 408 ntBASIC18.45■□□□□ 0.54
RARAP10276 AC124864.1-201ENST00000623408 392 ntBASIC18.45■□□□□ 0.54
RARAP10276 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.45■□□□□ 0.54
RARAP10276 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RARAP10276 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.45■□□□□ 0.54
RARAP10276 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.45■□□□□ 0.54
RARAP10276 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RARAP10276 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.44■□□□□ 0.54
RARAP10276 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
RARAP10276 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.44■□□□□ 0.54
RARAP10276 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
RARAP10276 AL845331.1-201ENST00000424978 1190 ntBASIC18.44■□□□□ 0.54
RARAP10276 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.44■□□□□ 0.54
RARAP10276 KRT8P26-201ENST00000534154 1276 ntBASIC18.44■□□□□ 0.54
RARAP10276 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.44■□□□□ 0.54
RARAP10276 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.44■□□□□ 0.54
RARAP10276 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.44■□□□□ 0.54
RARAP10276 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
RARAP10276 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RARAP10276 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.44■□□□□ 0.54
RARAP10276 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RARAP10276 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.44■□□□□ 0.54
RARAP10276 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RARAP10276 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms