Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD4O95243 AC107918.4-202ENST00000641623 219 ntBASIC20.96■□□□□ 0.95
MBD4O95243 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
MBD4O95243 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD4O95243 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.96■□□□□ 0.95
MBD4O95243 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MBD4O95243 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MBD4O95243 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MBD4O95243 AC134043.2-201ENST00000624206 2238 ntBASIC20.96■□□□□ 0.95
MBD4O95243 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MBD4O95243 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 AL133373.2-201ENST00000623187 2828 ntBASIC20.95■□□□□ 0.94
MBD4O95243 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD4O95243 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD4O95243 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
MBD4O95243 AP000347.1-202ENST00000435868 847 ntBASIC20.95■□□□□ 0.94
MBD4O95243 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD4O95243 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.95■□□□□ 0.94
MBD4O95243 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD4O95243 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.95■□□□□ 0.94
MBD4O95243 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.95■□□□□ 0.94
MBD4O95243 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
MBD4O95243 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD4O95243 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD4O95243 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.95■□□□□ 0.94
MBD4O95243 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
MBD4O95243 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MBD4O95243 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD4O95243 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MBD4O95243 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD4O95243 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
MBD4O95243 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD4O95243 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD4O95243 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD4O95243 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD4O95243 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
MBD4O95243 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD4O95243 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MBD4O95243 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD4O95243 HLA-J-201ENST00000462773 1622 ntBASIC20.94■□□□□ 0.94
MBD4O95243 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MBD4O95243 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD4O95243 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.94■□□□□ 0.94
MBD4O95243 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.94■□□□□ 0.94
MBD4O95243 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD4O95243 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.94■□□□□ 0.94
MBD4O95243 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.94■□□□□ 0.94
MBD4O95243 SIGLEC30P-201ENST00000455569 941 ntBASIC20.94■□□□□ 0.94
MBD4O95243 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.94■□□□□ 0.94
MBD4O95243 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD4O95243 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.94■□□□□ 0.94
MBD4O95243 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.94■□□□□ 0.94
MBD4O95243 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
MBD4O95243 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.94■□□□□ 0.94
MBD4O95243 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.94■□□□□ 0.94
MBD4O95243 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD4O95243 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD4O95243 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
MBD4O95243 NOC2LP2-201ENST00000407594 1944 ntBASIC20.94■□□□□ 0.94
MBD4O95243 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MBD4O95243 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 AL590627.1-203ENST00000421194 1026 ntBASIC20.93■□□□□ 0.94
MBD4O95243 LAGE3P1-201ENST00000425356 484 ntBASIC20.93■□□□□ 0.94
MBD4O95243 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.93■□□□□ 0.94
MBD4O95243 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.93■□□□□ 0.94
MBD4O95243 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.93■□□□□ 0.94
MBD4O95243 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
MBD4O95243 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.93■□□□□ 0.94
MBD4O95243 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 AC120114.3-201ENST00000611923 658 ntBASIC20.93■□□□□ 0.94
MBD4O95243 AL139327.4-201ENST00000612362 153 ntBASIC20.93■□□□□ 0.94
MBD4O95243 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.93■□□□□ 0.94
MBD4O95243 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MBD4O95243 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms