Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CEP290O15078 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CEP290O15078 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.83■□□□□ 0.6
CEP290O15078 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CEP290O15078 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CEP290O15078 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.82■□□□□ 0.6
CEP290O15078 AC009477.1-201ENST00000452936 217 ntBASIC18.82■□□□□ 0.6
CEP290O15078 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.82■□□□□ 0.6
CEP290O15078 AC109462.3-201ENST00000573934 613 ntBASIC18.82■□□□□ 0.6
CEP290O15078 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.82■□□□□ 0.6
CEP290O15078 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.82■□□□□ 0.6
CEP290O15078 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.82■□□□□ 0.6
CEP290O15078 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CEP290O15078 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.82■□□□□ 0.6
CEP290O15078 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 AC093677.2-201ENST00000600169 1863 ntBASIC18.82■□□□□ 0.6
CEP290O15078 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.82■□□□□ 0.6
CEP290O15078 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.82■□□□□ 0.6
CEP290O15078 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.82■□□□□ 0.6
CEP290O15078 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.82■□□□□ 0.6
CEP290O15078 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.82■□□□□ 0.6
CEP290O15078 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.82■□□□□ 0.6
CEP290O15078 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.82■□□□□ 0.6
CEP290O15078 AC009336.1-201ENST00000608941 1553 ntBASIC18.82■□□□□ 0.6
CEP290O15078 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEP290O15078 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.82■□□□□ 0.6
CEP290O15078 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.81■□□□□ 0.6
CEP290O15078 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.81■□□□□ 0.6
CEP290O15078 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.81■□□□□ 0.6
CEP290O15078 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
CEP290O15078 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.81■□□□□ 0.6
CEP290O15078 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.81■□□□□ 0.6
CEP290O15078 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.81■□□□□ 0.6
CEP290O15078 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CEP290O15078 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.81■□□□□ 0.6
CEP290O15078 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.81■□□□□ 0.6
CEP290O15078 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.81■□□□□ 0.6
CEP290O15078 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.81■□□□□ 0.6
CEP290O15078 MIR4259-201ENST00000584466 101 ntBASIC18.81■□□□□ 0.6
CEP290O15078 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.81■□□□□ 0.6
CEP290O15078 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CEP290O15078 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.81■□□□□ 0.6
CEP290O15078 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CEP290O15078 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.81■□□□□ 0.6
CEP290O15078 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.81■□□□□ 0.6
CEP290O15078 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CEP290O15078 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEP290O15078 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CEP290O15078 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.8■□□□□ 0.6
CEP290O15078 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CEP290O15078 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CEP290O15078 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.8■□□□□ 0.6
CEP290O15078 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
CEP290O15078 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.8■□□□□ 0.6
CEP290O15078 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.8■□□□□ 0.6
CEP290O15078 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.8■□□□□ 0.6
CEP290O15078 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.8■□□□□ 0.6
CEP290O15078 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CEP290O15078 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
CEP290O15078 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CEP290O15078 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.8■□□□□ 0.6
CEP290O15078 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CEP290O15078 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.8■□□□□ 0.6
CEP290O15078 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CEP290O15078 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.8■□□□□ 0.6
CEP290O15078 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CEP290O15078 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CEP290O15078 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CEP290O15078 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CEP290O15078 COX5BP2-201ENST00000392354 334 ntBASIC18.8■□□□□ 0.6
CEP290O15078 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CEP290O15078 AC087163.2-201ENST00000457299 853 ntBASIC18.8■□□□□ 0.6
CEP290O15078 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.8■□□□□ 0.6
CEP290O15078 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.8■□□□□ 0.6
CEP290O15078 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CEP290O15078 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.8■□□□□ 0.6
CEP290O15078 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.8■□□□□ 0.6
CEP290O15078 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms