Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 BX276092.5-203ENST00000456199 560 ntBASIC18.25■□□□□ 0.51
SRRM3A6NNA2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 AL160286.2-201ENST00000567150 934 ntBASIC18.25■□□□□ 0.51
SRRM3A6NNA2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 AL121672.3-201ENST00000608644 468 ntBASIC18.25■□□□□ 0.51
SRRM3A6NNA2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 AC016734.2-201ENST00000624325 1377 ntBASIC18.25■□□□□ 0.51
SRRM3A6NNA2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM3A6NNA2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 PCDHA14-201ENST00000506751 2298 ntBASIC18.24■□□□□ 0.51
SRRM3A6NNA2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 MIR574-201ENST00000385209 96 ntBASIC18.24■□□□□ 0.51
SRRM3A6NNA2 AL590627.1-203ENST00000421194 1026 ntBASIC18.24■□□□□ 0.51
SRRM3A6NNA2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 SPDYE15P-201ENST00000424157 909 ntBASIC18.24■□□□□ 0.51
SRRM3A6NNA2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 AC092865.5-201ENST00000545435 363 ntBASIC18.24■□□□□ 0.51
SRRM3A6NNA2 GCSHP2-201ENST00000560971 527 ntBASIC18.24■□□□□ 0.51
SRRM3A6NNA2 AC091304.2-201ENST00000564639 760 ntBASIC18.24■□□□□ 0.51
SRRM3A6NNA2 LINC01711-201ENST00000598340 967 ntBASIC18.24■□□□□ 0.51
SRRM3A6NNA2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM3A6NNA2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 MRPL3P1-201ENST00000400109 1033 ntBASIC18.23■□□□□ 0.51
SRRM3A6NNA2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 AP002383.4-201ENST00000442518 975 ntBASIC18.23■□□□□ 0.51
SRRM3A6NNA2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 AP003041.3-201ENST00000527151 707 ntBASIC18.23■□□□□ 0.51
SRRM3A6NNA2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 AF228730.7-201ENST00000641842 219 ntBASIC18.23■□□□□ 0.51
SRRM3A6NNA2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM3A6NNA2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM3A6NNA2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms