Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 PVRIG2P-201ENST00000435460 978 ntBASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 DDX43P3-201ENST00000441064 443 ntBASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 AL512604.3-201ENST00000569583 964 ntBASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 AL157888.1-201ENST00000631930 593 ntBASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.85■□□□□ 0.29
NIPSNAP3AQ9UFN0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 TNRC18P3-201ENST00000441896 2691 ntBASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NIPSNAP3AQ9UFN0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
NIPSNAP3AQ9UFN0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NIPSNAP3AQ9UFN0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NIPSNAP3AQ9UFN0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 AL355075.4-201ENST00000554988 638 ntBASIC16.83■□□□□ 0.28
NIPSNAP3AQ9UFN0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms