Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 SLC25A6P5-201ENST00000435663 894 ntBASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 AC244107.1-201ENST00000442033 332 ntBASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 CEND1P1-201ENST00000451006 455 ntBASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 MIR4751-201ENST00000578027 74 ntBASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 AC116407.2-201ENST00000613639 860 ntBASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM7Q9NR12 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 GPR89P-201ENST00000407924 1495 ntBASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 SPDYE21P-201ENST00000413323 827 ntBASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 ELK2BP-201ENST00000415014 1224 ntBASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 VN2R19P-201ENST00000442399 1052 ntBASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 HCG4B-203ENST00000450128 991 ntBASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 COX20P2-201ENST00000452636 358 ntBASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 AC108073.2-201ENST00000464002 357 ntBASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 AC093028.1-201ENST00000622998 982 ntBASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PDLIM7Q9NR12 AL049757.1-201ENST00000616842 1596 ntBASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM7Q9NR12 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 AC019129.2-201ENST00000609837 1235 ntBASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 AL589182.2-201ENST00000619332 1049 ntBASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 AC004706.3-202ENST00000621574 984 ntBASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 NOC2LP1-202ENST00000452600 2235 ntBASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms