Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC074051.2-201ENST00000565115 352 ntBASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.69■□□□□ 0.74
CCSER1Q9C0I3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 RCN1P2-201ENST00000398357 915 ntBASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 AC092119.3-201ENST00000612618 583 ntBASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCSER1Q9C0I3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 AP001094.4-201ENST00000579008 2176 ntBASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 AC104819.1-201ENST00000504587 486 ntBASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 AP000867.3-201ENST00000524675 377 ntBASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 AC114341.1-201ENST00000618070 349 ntBASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCSER1Q9C0I3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 AC096582.2-201ENST00000510860 516 ntBASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 LTB4R2-202ENST00000528054 3092 ntBASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCSER1Q9C0I3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms