Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 YBX1P2-201ENST00000489612 999 ntBASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 LINC01023-201ENST00000606054 436 ntBASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 AL023806.1-201ENST00000603994 1649 ntBASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 AC132938.6-201ENST00000623828 1655 ntBASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRDL1Q9BU40 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 AL121761.2-201ENST00000598007 1648 ntBASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRDL1Q9BU40 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 AC117947.1-201ENST00000427448 529 ntBASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 AC079602.3-201ENST00000623931 403 ntBASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRDL1Q9BU40 AL356309.3-201ENST00000624132 1934 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms