Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDCA3Q99618 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDCA3Q99618 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.18■□□□□ 0.5
CDCA3Q99618 AC069335.1-201ENST00000489972 472 ntBASIC18.18■□□□□ 0.5
CDCA3Q99618 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.18■□□□□ 0.5
CDCA3Q99618 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.18■□□□□ 0.5
CDCA3Q99618 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.18■□□□□ 0.5
CDCA3Q99618 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
CDCA3Q99618 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.18■□□□□ 0.5
CDCA3Q99618 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCA3Q99618 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.17■□□□□ 0.5
CDCA3Q99618 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.17■□□□□ 0.5
CDCA3Q99618 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.17■□□□□ 0.5
CDCA3Q99618 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 AL592309.1-201ENST00000443127 649 ntBASIC18.17■□□□□ 0.5
CDCA3Q99618 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 DUX4L27-201ENST00000554796 1261 ntBASIC18.17■□□□□ 0.5
CDCA3Q99618 AC099522.2-201ENST00000607001 744 ntBASIC18.17■□□□□ 0.5
CDCA3Q99618 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.17■□□□□ 0.5
CDCA3Q99618 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.17■□□□□ 0.5
CDCA3Q99618 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDCA3Q99618 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.17■□□□□ 0.5
CDCA3Q99618 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.16■□□□□ 0.5
CDCA3Q99618 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.16■□□□□ 0.5
CDCA3Q99618 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.16■□□□□ 0.5
CDCA3Q99618 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.16■□□□□ 0.5
CDCA3Q99618 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.16■□□□□ 0.5
CDCA3Q99618 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDCA3Q99618 AC051619.7-201ENST00000568314 623 ntBASIC18.16■□□□□ 0.5
CDCA3Q99618 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
CDCA3Q99618 AP001059.3-201ENST00000619053 235 ntBASIC18.16■□□□□ 0.5
CDCA3Q99618 AF228730.6-201ENST00000641497 218 ntBASIC18.16■□□□□ 0.5
CDCA3Q99618 AC084121.3-201ENST00000641716 218 ntBASIC18.16■□□□□ 0.5
CDCA3Q99618 AC105233.6-201ENST00000642093 218 ntBASIC18.16■□□□□ 0.5
CDCA3Q99618 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA3Q99618 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.16■□□□□ 0.5
CDCA3Q99618 AC093677.2-201ENST00000600169 1863 ntBASIC18.16■□□□□ 0.5
CDCA3Q99618 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.16■□□□□ 0.5
CDCA3Q99618 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.15■□□□□ 0.5
CDCA3Q99618 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms