Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 PRSS29P-201ENST00000440800 595 ntBASIC17.61■□□□□ 0.41
HMGB4Q8WW32 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGB4Q8WW32 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 YBX1P5-201ENST00000509441 847 ntBASIC17.6■□□□□ 0.41
HMGB4Q8WW32 IGHV3-52-201ENST00000519770 353 ntBASIC17.6■□□□□ 0.41
HMGB4Q8WW32 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 C20orf181-201ENST00000623918 480 ntBASIC17.6■□□□□ 0.41
HMGB4Q8WW32 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 GPR89P-201ENST00000407924 1495 ntBASIC17.6■□□□□ 0.41
HMGB4Q8WW32 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 AC097637.2-201ENST00000624096 1997 ntBASIC17.6■□□□□ 0.41
HMGB4Q8WW32 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGB4Q8WW32 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 BX276092.7-203ENST00000637198 1536 ntBASIC17.59■□□□□ 0.41
HMGB4Q8WW32 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 HTR5BP-201ENST00000430851 1154 ntBASIC17.59■□□□□ 0.41
HMGB4Q8WW32 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGB4Q8WW32 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
HMGB4Q8WW32 AC093677.2-201ENST00000600169 1863 ntBASIC17.58■□□□□ 0.41
HMGB4Q8WW32 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HMGB4Q8WW32 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGB4Q8WW32 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.58■□□□□ 0.41
HMGB4Q8WW32 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGB4Q8WW32 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGB4Q8WW32 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms