Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 NSUN5P1-202ENST00000421140 1535 ntBASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 NSUN5P2-203ENST00000457352 1529 ntBASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 AC010460.3-201ENST00000511359 1579 ntBASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 AC138894.3-201ENST00000603787 634 ntBASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCC2Q8TAQ2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCC2Q8TAQ2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 LYSMD4-203ENST00000378904 2122 ntBASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 AL121772.3-201ENST00000610840 674 ntBASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SMARCC2Q8TAQ2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms