Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 AC034236.2-201ENST00000606662 1610 ntBASIC16.53■□□□□ 0.24
CCDC71Q8IV32 KRT18P1-202ENST00000452408 1331 ntBASIC16.53■□□□□ 0.24
CCDC71Q8IV32 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 AL138688.1-201ENST00000624851 1594 ntBASIC16.53■□□□□ 0.24
CCDC71Q8IV32 TSPY22P-201ENST00000427496 604 ntBASIC16.53■□□□□ 0.24
CCDC71Q8IV32 KRT18P23-201ENST00000435622 1283 ntBASIC16.53■□□□□ 0.24
CCDC71Q8IV32 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71Q8IV32 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 LINC01126-201ENST00000623515 1646 ntBASIC16.52■□□□□ 0.24
CCDC71Q8IV32 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 MIR662-201ENST00000384847 95 ntBASIC16.52■□□□□ 0.24
CCDC71Q8IV32 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 CHCHD2P8-201ENST00000429873 447 ntBASIC16.52■□□□□ 0.24
CCDC71Q8IV32 UNC93B7-201ENST00000509439 705 ntBASIC16.52■□□□□ 0.24
CCDC71Q8IV32 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC71Q8IV32 HTR7P1-202ENST00000624664 4411 ntBASIC16.52■□□□□ 0.23
CCDC71Q8IV32 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71Q8IV32 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CCDC71Q8IV32 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC71Q8IV32 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71Q8IV32 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71Q8IV32 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71Q8IV32 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCDC71Q8IV32 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71Q8IV32 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 AL163051.1-201ENST00000569214 1512 ntBASIC16.51■□□□□ 0.23
CCDC71Q8IV32 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 AC111152.3-201ENST00000569699 673 ntBASIC16.51■□□□□ 0.23
CCDC71Q8IV32 RNF126P1-202ENST00000569893 925 ntBASIC16.51■□□□□ 0.23
CCDC71Q8IV32 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
CCDC71Q8IV32 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms