Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CKS1BP61024 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CKS1BP61024 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CKS1BP61024 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CKS1BP61024 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.39□□□□□ -0.43
CKS1BP61024 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.39□□□□□ -0.43
CKS1BP61024 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 AC069152.1-201ENST00000438030 544 ntBASIC12.39□□□□□ -0.43
CKS1BP61024 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.39□□□□□ -0.43
CKS1BP61024 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.39□□□□□ -0.43
CKS1BP61024 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.39□□□□□ -0.43
CKS1BP61024 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.39□□□□□ -0.43
CKS1BP61024 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 KRT8P32-201ENST00000512863 1461 ntBASIC12.39□□□□□ -0.43
CKS1BP61024 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
CKS1BP61024 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CKS1BP61024 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.39□□□□□ -0.43
CKS1BP61024 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS1BP61024 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 KRT8P3-201ENST00000519669 1449 ntBASIC12.38□□□□□ -0.43
CKS1BP61024 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.38□□□□□ -0.43
CKS1BP61024 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.38□□□□□ -0.43
CKS1BP61024 AL109923.1-201ENST00000618799 583 ntBASIC12.38□□□□□ -0.43
CKS1BP61024 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 AL357033.4-201ENST00000617703 1807 ntBASIC12.38□□□□□ -0.43
CKS1BP61024 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms