Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HTTP42858 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.6■□□□□ 0.73
HTTP42858 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.6■□□□□ 0.73
HTTP42858 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
HTTP42858 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.6■□□□□ 0.73
HTTP42858 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.6■□□□□ 0.73
HTTP42858 SPCS2P4-201ENST00000436160 681 ntBASIC19.6■□□□□ 0.73
HTTP42858 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.6■□□□□ 0.73
HTTP42858 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.6■□□□□ 0.73
HTTP42858 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.6■□□□□ 0.73
HTTP42858 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.6■□□□□ 0.73
HTTP42858 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTTP42858 GPR53P-205ENST00000457298 1084 ntBASIC19.6■□□□□ 0.73
HTTP42858 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.6■□□□□ 0.73
HTTP42858 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.6■□□□□ 0.73
HTTP42858 ANO7L1-203ENST00000602586 1720 ntBASIC19.6■□□□□ 0.73
HTTP42858 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.59■□□□□ 0.73
HTTP42858 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
HTTP42858 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.59■□□□□ 0.73
HTTP42858 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.59■□□□□ 0.73
HTTP42858 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.59■□□□□ 0.73
HTTP42858 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.59■□□□□ 0.73
HTTP42858 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.59■□□□□ 0.73
HTTP42858 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.59■□□□□ 0.73
HTTP42858 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTTP42858 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.59■□□□□ 0.73
HTTP42858 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.59■□□□□ 0.73
HTTP42858 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.59■□□□□ 0.73
HTTP42858 AC005332.7-201ENST00000614046 2005 ntBASIC19.59■□□□□ 0.73
HTTP42858 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HTTP42858 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HTTP42858 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.58■□□□□ 0.73
HTTP42858 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.58■□□□□ 0.73
HTTP42858 IGHV3-71-201ENST00000523324 359 ntBASIC19.58■□□□□ 0.73
HTTP42858 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HTTP42858 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HTTP42858 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HTTP42858 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
HTTP42858 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HTTP42858 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
HTTP42858 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HTTP42858 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.58■□□□□ 0.72
HTTP42858 MIR6805-201ENST00000615055 62 ntBASIC19.58■□□□□ 0.72
HTTP42858 AC009336.1-201ENST00000608941 1553 ntBASIC19.58■□□□□ 0.72
HTTP42858 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.58■□□□□ 0.72
HTTP42858 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HTTP42858 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.58■□□□□ 0.72
HTTP42858 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.58■□□□□ 0.72
HTTP42858 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.58■□□□□ 0.72
HTTP42858 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HTTP42858 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HTTP42858 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HTTP42858 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HTTP42858 TSSK5P-201ENST00000423978 907 ntBASIC19.57■□□□□ 0.72
HTTP42858 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.57■□□□□ 0.72
HTTP42858 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.57■□□□□ 0.72
HTTP42858 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
HTTP42858 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.57■□□□□ 0.72
HTTP42858 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
HTTP42858 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.57■□□□□ 0.72
HTTP42858 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HTTP42858 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.57■□□□□ 0.72
HTTP42858 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.57■□□□□ 0.72
HTTP42858 AC069120.2-201ENST00000524091 540 ntBASIC19.57■□□□□ 0.72
HTTP42858 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.57■□□□□ 0.72
HTTP42858 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.57■□□□□ 0.72
HTTP42858 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.57■□□□□ 0.72
HTTP42858 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.57■□□□□ 0.72
HTTP42858 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.56■□□□□ 0.72
HTTP42858 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HTTP42858 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.56■□□□□ 0.72
HTTP42858 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HTTP42858 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.56■□□□□ 0.72
HTTP42858 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HTTP42858 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.56■□□□□ 0.72
HTTP42858 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms