Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC1P35251 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC1P35251 AL645608.8-201ENST00000606034 2086 ntBASIC18.58■□□□□ 0.57
RFC1P35251 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RFC1P35251 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC1P35251 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.58■□□□□ 0.56
RFC1P35251 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RFC1P35251 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.58■□□□□ 0.56
RFC1P35251 AP002383.4-201ENST00000442518 975 ntBASIC18.58■□□□□ 0.56
RFC1P35251 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
RFC1P35251 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.58■□□□□ 0.56
RFC1P35251 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.58■□□□□ 0.56
RFC1P35251 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RFC1P35251 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.58■□□□□ 0.56
RFC1P35251 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.58■□□□□ 0.56
RFC1P35251 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.58■□□□□ 0.56
RFC1P35251 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC1P35251 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC1P35251 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RFC1P35251 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.57■□□□□ 0.56
RFC1P35251 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.57■□□□□ 0.56
RFC1P35251 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.57■□□□□ 0.56
RFC1P35251 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC1P35251 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.57■□□□□ 0.56
RFC1P35251 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC1P35251 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 AP005901.3-202ENST00000581653 237 ntBASIC18.57■□□□□ 0.56
RFC1P35251 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC1P35251 AL138831.2-201ENST00000606564 490 ntBASIC18.57■□□□□ 0.56
RFC1P35251 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC1P35251 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RFC1P35251 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC1P35251 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC1P35251 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
RFC1P35251 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC1P35251 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC1P35251 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFC1P35251 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RFC1P35251 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RFC1P35251 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC1P35251 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RFC1P35251 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RFC1P35251 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 COX5BP2-201ENST00000392354 334 ntBASIC18.56■□□□□ 0.56
RFC1P35251 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 AC007967.3-201ENST00000434308 558 ntBASIC18.56■□□□□ 0.56
RFC1P35251 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.56■□□□□ 0.56
RFC1P35251 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.56■□□□□ 0.56
RFC1P35251 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.56■□□□□ 0.56
RFC1P35251 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RFC1P35251 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms