Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CAPN1P07384 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.37■□□□□ 0.37
CAPN1P07384 TPSP2-201ENST00000561760 610 ntBASIC17.37■□□□□ 0.37
CAPN1P07384 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.37■□□□□ 0.37
CAPN1P07384 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.37■□□□□ 0.37
CAPN1P07384 AC005332.3-201ENST00000589904 676 ntBASIC17.37■□□□□ 0.37
CAPN1P07384 AL390719.2-201ENST00000606993 987 ntBASIC17.37■□□□□ 0.37
CAPN1P07384 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CAPN1P07384 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN1P07384 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN1P07384 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CAPN1P07384 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CAPN1P07384 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN1P07384 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CAPN1P07384 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CAPN1P07384 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 FER1L4-210ENST00000615531 5998 ntBASIC17.36■□□□□ 0.37
CAPN1P07384 AC108860.2-201ENST00000562760 2183 ntBASIC17.36■□□□□ 0.37
CAPN1P07384 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CAPN1P07384 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN1P07384 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN1P07384 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN1P07384 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN1P07384 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN1P07384 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN1P07384 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN1P07384 DRAXINP1-201ENST00000437611 948 ntBASIC17.36■□□□□ 0.37
CAPN1P07384 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN1P07384 AC113404.2-201ENST00000507884 177 ntBASIC17.36■□□□□ 0.37
CAPN1P07384 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN1P07384 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CAPN1P07384 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN1P07384 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CAPN1P07384 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN1P07384 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN1P07384 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CAPN1P07384 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN1P07384 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN1P07384 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPN1P07384 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPN1P07384 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
CAPN1P07384 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN1P07384 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CAPN1P07384 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CAPN1P07384 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPN1P07384 AP003733.1-201ENST00000491725 852 ntBASIC17.35■□□□□ 0.37
CAPN1P07384 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPN1P07384 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPN1P07384 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPN1P07384 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN1P07384 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.35■□□□□ 0.37
CAPN1P07384 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN1P07384 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CAPN1P07384 KRT18P1-202ENST00000452408 1331 ntBASIC17.35■□□□□ 0.37
CAPN1P07384 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN1P07384 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
CAPN1P07384 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN1P07384 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms