Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.9■□□□□ 0.62
TNRC18O15417 AL355334.1-201ENST00000417713 215 ntBASIC18.9■□□□□ 0.62
TNRC18O15417 LINC00982-205ENST00000420957 435 ntBASIC18.9■□□□□ 0.62
TNRC18O15417 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.9■□□□□ 0.62
TNRC18O15417 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TNRC18O15417 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TNRC18O15417 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 AC012676.1-201ENST00000574705 1949 ntBASIC18.9■□□□□ 0.62
TNRC18O15417 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNRC18O15417 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 MPRIPP1-201ENST00000452433 1089 ntBASIC18.9■□□□□ 0.62
TNRC18O15417 C2orf69P2-201ENST00000562032 1123 ntBASIC18.9■□□□□ 0.62
TNRC18O15417 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.9■□□□□ 0.62
TNRC18O15417 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.9■□□□□ 0.62
TNRC18O15417 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.62
TNRC18O15417 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.89■□□□□ 0.62
TNRC18O15417 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TNRC18O15417 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.89■□□□□ 0.61
TNRC18O15417 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.89■□□□□ 0.61
TNRC18O15417 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.89■□□□□ 0.61
TNRC18O15417 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TNRC18O15417 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TNRC18O15417 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNRC18O15417 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNRC18O15417 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.89■□□□□ 0.61
TNRC18O15417 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.89■□□□□ 0.61
TNRC18O15417 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNRC18O15417 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNRC18O15417 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TNRC18O15417 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TNRC18O15417 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.89■□□□□ 0.61
TNRC18O15417 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.89■□□□□ 0.61
TNRC18O15417 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.89■□□□□ 0.61
TNRC18O15417 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.89■□□□□ 0.61
TNRC18O15417 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.89■□□□□ 0.61
TNRC18O15417 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.89■□□□□ 0.61
TNRC18O15417 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.89■□□□□ 0.61
TNRC18O15417 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TNRC18O15417 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TNRC18O15417 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNRC18O15417 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNRC18O15417 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNRC18O15417 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
TNRC18O15417 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.88■□□□□ 0.61
TNRC18O15417 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TNRC18O15417 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.88■□□□□ 0.61
TNRC18O15417 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.88■□□□□ 0.61
TNRC18O15417 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.88■□□□□ 0.61
TNRC18O15417 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.88■□□□□ 0.61
TNRC18O15417 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TNRC18O15417 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.88■□□□□ 0.61
TNRC18O15417 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.88■□□□□ 0.61
TNRC18O15417 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 RNA5SP412-201ENST00000516234 123 ntBASIC18.88■□□□□ 0.61
TNRC18O15417 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.88■□□□□ 0.61
TNRC18O15417 AC015967.2-201ENST00000624092 234 ntBASIC18.88■□□□□ 0.61
TNRC18O15417 AC006435.4-201ENST00000625037 234 ntBASIC18.88■□□□□ 0.61
TNRC18O15417 AL356737.1-201ENST00000634391 234 ntBASIC18.88■□□□□ 0.61
TNRC18O15417 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.88■□□□□ 0.61
TNRC18O15417 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNRC18O15417 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.88■□□□□ 0.61
TNRC18O15417 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNRC18O15417 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.87■□□□□ 0.61
TNRC18O15417 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNRC18O15417 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.87■□□□□ 0.61
TNRC18O15417 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TNRC18O15417 U62317.3-201ENST00000608319 855 ntBASIC18.87■□□□□ 0.61
TNRC18O15417 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.87■□□□□ 0.61
TNRC18O15417 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TNRC18O15417 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNRC18O15417 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.87■□□□□ 0.61
TNRC18O15417 AC087499.5-201ENST00000452760 1342 ntBASIC18.87■□□□□ 0.61
TNRC18O15417 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNRC18O15417 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNRC18O15417 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNRC18O15417 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TNRC18O15417 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.87■□□□□ 0.61
TNRC18O15417 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.87■□□□□ 0.61
TNRC18O15417 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.87■□□□□ 0.61
TNRC18O15417 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.87■□□□□ 0.61
TNRC18O15417 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.87■□□□□ 0.61
TNRC18O15417 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.87■□□□□ 0.61
TNRC18O15417 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNRC18O15417 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms