Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
DDX39AO00148 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX39AO00148 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.82■□□□□ 0.76
DDX39AO00148 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 AP000347.1-202ENST00000435868 847 ntBASIC19.82■□□□□ 0.76
DDX39AO00148 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.82■□□□□ 0.76
DDX39AO00148 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.82■□□□□ 0.76
DDX39AO00148 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 RNA5SP419-201ENST00000515908 135 ntBASIC19.82■□□□□ 0.76
DDX39AO00148 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 AC064862.7-201ENST00000604520 867 ntBASIC19.82■□□□□ 0.76
DDX39AO00148 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
DDX39AO00148 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX39AO00148 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDX39AO00148 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
DDX39AO00148 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DDX39AO00148 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX39AO00148 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DDX39AO00148 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
DDX39AO00148 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.81■□□□□ 0.76
DDX39AO00148 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.81■□□□□ 0.76
DDX39AO00148 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX39AO00148 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.81■□□□□ 0.76
DDX39AO00148 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX39AO00148 AL139288.1-201ENST00000623748 933 ntBASIC19.81■□□□□ 0.76
DDX39AO00148 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX39AO00148 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DDX39AO00148 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.81■□□□□ 0.76
DDX39AO00148 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
DDX39AO00148 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 AC132938.5-201ENST00000624980 1813 ntBASIC19.81■□□□□ 0.76
DDX39AO00148 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX39AO00148 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX39AO00148 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX39AO00148 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 AC079776.2-201ENST00000641154 1609 ntBASIC19.8■□□□□ 0.76
DDX39AO00148 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX39AO00148 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
DDX39AO00148 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX39AO00148 MTDHP4-201ENST00000600287 670 ntBASIC19.8■□□□□ 0.76
DDX39AO00148 AC025062.2-201ENST00000605477 670 ntBASIC19.8■□□□□ 0.76
DDX39AO00148 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 MIR7706-201ENST00000613747 67 ntBASIC19.8■□□□□ 0.76
DDX39AO00148 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.8■□□□□ 0.76
DDX39AO00148 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
DDX39AO00148 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
DDX39AO00148 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX39AO00148 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX39AO00148 AL353593.2-201ENST00000602529 1483 ntBASIC19.79■□□□□ 0.76
DDX39AO00148 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
DDX39AO00148 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
DDX39AO00148 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX39AO00148 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX39AO00148 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
DDX39AO00148 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
DDX39AO00148 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
DDX39AO00148 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX39AO00148 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX39AO00148 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX39AO00148 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
DDX39AO00148 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX39AO00148 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX39AO00148 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DDX39AO00148 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DDX39AO00148 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.79■□□□□ 0.76
DDX39AO00148 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms