Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 AP001269.4-201ENST00000609611 512 ntBASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 AC109462.3-201ENST00000573934 613 ntBASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 MTDHP3-201ENST00000594186 672 ntBASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 AL121912.1-201ENST00000603683 238 ntBASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 KRT8P10-201ENST00000450021 1447 ntBASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3AQ9Y6K1 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 SIRPAP1-201ENST00000448467 1770 ntBASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 SCARNA2-201ENST00000458748 420 ntBASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 AC008608.2-201ENST00000606089 416 ntBASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3AQ9Y6K1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 AC073592.5-201ENST00000624854 528 ntBASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNMT3AQ9Y6K1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 SIGLEC16-201ENST00000599858 1437 ntBASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.27■□□□□ 0.35
DNMT3AQ9Y6K1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms