Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 AC092338.2-201ENST00000568827 1415 ntBASIC21.66■■□□□ 1.06
UPF2Q9HAU5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UPF2Q9HAU5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 RPS2P55-201ENST00000397318 883 ntBASIC21.65■■□□□ 1.06
UPF2Q9HAU5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 AC107956.1-201ENST00000494359 873 ntBASIC21.65■■□□□ 1.06
UPF2Q9HAU5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 CD99P1-205ENST00000527459 561 ntBASIC21.65■■□□□ 1.06
UPF2Q9HAU5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 AC116562.4-202ENST00000641738 218 ntBASIC21.65■■□□□ 1.06
UPF2Q9HAU5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UPF2Q9HAU5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.64■■□□□ 1.06
UPF2Q9HAU5 AC016396.2-201ENST00000562575 1417 ntBASIC21.64■■□□□ 1.06
UPF2Q9HAU5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
UPF2Q9HAU5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
UPF2Q9HAU5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UPF2Q9HAU5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
UPF2Q9HAU5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC21.64■■□□□ 1.06
UPF2Q9HAU5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
UPF2Q9HAU5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.63■■□□□ 1.05
UPF2Q9HAU5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms