Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 FEM1AP3-201ENST00000403722 1741 ntBASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 RNPS1P1-201ENST00000507437 918 ntBASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 MIR5100-201ENST00000579544 119 ntBASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1BQ9H9Y6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 AC092865.5-201ENST00000545435 363 ntBASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 BNIP3P18-201ENST00000593976 575 ntBASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1BQ9H9Y6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1BQ9H9Y6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms