Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
FOXP3Q9BZS1 AC016396.2-201ENST00000562575 1417 ntBASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 HYMAI.1-201ENST00000620949 238 ntBASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 REXO1L11P-201ENST00000620964 1927 ntBASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXP3Q9BZS1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 AC011676.5-201ENST00000624864 2660 ntBASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXP3Q9BZS1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 CLEC4GP1-201ENST00000596555 870 ntBASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 AC009949.1-201ENST00000623048 1830 ntBASIC18.21■□□□□ 0.51
FOXP3Q9BZS1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
FOXP3Q9BZS1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
FOXP3Q9BZS1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms