Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 PRR31-201ENST00000371629 978 ntTSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 SLC25A6P5-201ENST00000435663 894 ntBASIC10.54□□□□□ -0.72
LIMD2Q9BT23 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 AC009947.2-201ENST00000444014 672 ntBASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 FLYWCH1P1-201ENST00000460917 1874 ntBASIC10.54□□□□□ -0.72
LIMD2Q9BT23 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 AL118508.1-201ENST00000613502 2345 ntBASIC10.54□□□□□ -0.72
LIMD2Q9BT23 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 AL031432.5-201ENST00000641059 760 ntBASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TSPY26P-202ENST00000565928 3884 ntBASIC10.54□□□□□ -0.72
LIMD2Q9BT23 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LIMD2Q9BT23 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms