Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 PIN1P1-201ENST00000412108 996 ntBASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 COX5BP8-201ENST00000416911 349 ntBASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 IGHV3-52-201ENST00000519770 353 ntBASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 SPDYE22P-201ENST00000582158 798 ntBASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTCRAQ6ISU1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 AC007952.6-201ENST00000573168 2673 ntBASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 AC003957.1-201ENST00000625108 2673 ntBASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 SPDYE7P-202ENST00000420373 878 ntBASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 AC140658.5-201ENST00000438532 169 ntBASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 SERBP1P5-201ENST00000510079 1181 ntBASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 AL135744.1-201ENST00000565098 629 ntBASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCRAQ6ISU1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 AC069120.2-201ENST00000524091 540 ntBASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PTCRAQ6ISU1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCRAQ6ISU1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCRAQ6ISU1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCRAQ6ISU1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTCRAQ6ISU1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCRAQ6ISU1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PTCRAQ6ISU1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 ARSEP1-201ENST00000420443 635 ntBASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 KRT17P7-201ENST00000451704 1104 ntBASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 AC097493.3-201ENST00000509725 367 ntBASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 AC026150.2-201ENST00000564693 1156 ntBASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms