Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
SNRPEP62304 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.52□□□□□ -0.25
SNRPEP62304 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SNRPEP62304 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SNRPEP62304 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNRPEP62304 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SNRPEP62304 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 AL359183.1-201ENST00000623796 2132 ntBASIC13.51□□□□□ -0.25
SNRPEP62304 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SNRPEP62304 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 AC099791.2-201ENST00000605725 427 ntBASIC13.51□□□□□ -0.25
SNRPEP62304 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNRPEP62304 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNRPEP62304 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNRPEP62304 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SNRPEP62304 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 AC116353.5-201ENST00000638148 1699 ntBASIC13.5□□□□□ -0.25
SNRPEP62304 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNRPEP62304 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SNRPEP62304 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SNRPEP62304 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 AC087633.2-202ENST00000565166 1439 ntBASIC13.5□□□□□ -0.25
SNRPEP62304 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SNRPEP62304 AC021242.3-201ENST00000607598 1377 ntBASIC13.5□□□□□ -0.25
SNRPEP62304 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
SNRPEP62304 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNRPEP62304 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNRPEP62304 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.5□□□□□ -0.25
SNRPEP62304 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.5□□□□□ -0.25
SNRPEP62304 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNRPEP62304 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms