Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.65■□□□□ 0.58
GSCP56915 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.65■□□□□ 0.58
GSCP56915 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GSCP56915 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GSCP56915 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.65■□□□□ 0.58
GSCP56915 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.65■□□□□ 0.58
GSCP56915 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.65■□□□□ 0.58
GSCP56915 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSCP56915 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
GSCP56915 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
GSCP56915 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.64■□□□□ 0.58
GSCP56915 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GSCP56915 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GSCP56915 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GSCP56915 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.64■□□□□ 0.57
GSCP56915 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.64■□□□□ 0.57
GSCP56915 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
GSCP56915 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.64■□□□□ 0.57
GSCP56915 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 AC087388.1-201ENST00000571370 1112 ntBASIC18.64■□□□□ 0.57
GSCP56915 IGHV3-41-201ENST00000613121 348 ntBASIC18.64■□□□□ 0.57
GSCP56915 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GSCP56915 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GSCP56915 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.64■□□□□ 0.57
GSCP56915 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GSCP56915 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
GSCP56915 AL645608.8-201ENST00000606034 2086 ntBASIC18.64■□□□□ 0.57
GSCP56915 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GSCP56915 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.64■□□□□ 0.57
GSCP56915 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.64■□□□□ 0.57
GSCP56915 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
GSCP56915 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.63■□□□□ 0.57
GSCP56915 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
GSCP56915 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
GSCP56915 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GSCP56915 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.63■□□□□ 0.57
GSCP56915 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.63■□□□□ 0.57
GSCP56915 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 AC002558.1-201ENST00000488906 803 ntBASIC18.63■□□□□ 0.57
GSCP56915 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.63■□□□□ 0.57
GSCP56915 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.63■□□□□ 0.57
GSCP56915 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.63■□□□□ 0.57
GSCP56915 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.63■□□□□ 0.57
GSCP56915 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.63■□□□□ 0.57
GSCP56915 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.63■□□□□ 0.57
GSCP56915 IER3-202ENST00000376377 1350 ntBASIC18.63■□□□□ 0.57
GSCP56915 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GSCP56915 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.63■□□□□ 0.57
GSCP56915 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.63■□□□□ 0.57
GSCP56915 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.63■□□□□ 0.57
GSCP56915 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GSCP56915 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.62■□□□□ 0.57
GSCP56915 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.62■□□□□ 0.57
GSCP56915 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GSCP56915 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GSCP56915 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GSCP56915 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.62■□□□□ 0.57
GSCP56915 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GSCP56915 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.62■□□□□ 0.57
GSCP56915 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.62■□□□□ 0.57
GSCP56915 AC007967.3-201ENST00000434308 558 ntBASIC18.62■□□□□ 0.57
GSCP56915 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GSCP56915 TSSC2-201ENST00000450217 709 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms