Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AP005117.1-201ENST00000584346 1413 ntBASIC19.43■□□□□ 0.7
PEX3P56589 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.43■□□□□ 0.7
PEX3P56589 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 AC004870.1-201ENST00000315132 882 ntBASIC19.43■□□□□ 0.7
PEX3P56589 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.43■□□□□ 0.7
PEX3P56589 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.43■□□□□ 0.7
PEX3P56589 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.43■□□□□ 0.7
PEX3P56589 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.43■□□□□ 0.7
PEX3P56589 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.43■□□□□ 0.7
PEX3P56589 AP000867.4-201ENST00000641616 219 ntBASIC19.43■□□□□ 0.7
PEX3P56589 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
PEX3P56589 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.43■□□□□ 0.7
PEX3P56589 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.43■□□□□ 0.7
PEX3P56589 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.43■□□□□ 0.7
PEX3P56589 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 LINC00304-203ENST00000565008 1864 ntBASIC19.43■□□□□ 0.7
PEX3P56589 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.43■□□□□ 0.7
PEX3P56589 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PEX3P56589 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
PEX3P56589 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PEX3P56589 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PEX3P56589 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.42■□□□□ 0.7
PEX3P56589 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.42■□□□□ 0.7
PEX3P56589 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 GNAS-203ENST00000306120 1878 ntBASIC19.42■□□□□ 0.7
PEX3P56589 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.42■□□□□ 0.7
PEX3P56589 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 AC005104.2-201ENST00000427818 678 ntBASIC19.42■□□□□ 0.7
PEX3P56589 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.42■□□□□ 0.7
PEX3P56589 AC106795.1-205ENST00000512851 1056 ntBASIC19.42■□□□□ 0.7
PEX3P56589 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PEX3P56589 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.42■□□□□ 0.7
PEX3P56589 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PEX3P56589 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.42■□□□□ 0.7
PEX3P56589 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.42■□□□□ 0.7
PEX3P56589 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PEX3P56589 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PEX3P56589 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PEX3P56589 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX3P56589 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.42■□□□□ 0.7
PEX3P56589 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
PEX3P56589 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 AL353593.2-201ENST00000602529 1483 ntBASIC19.41■□□□□ 0.7
PEX3P56589 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
PEX3P56589 PMPCAP1-201ENST00000508114 1576 ntBASIC19.41■□□□□ 0.7
PEX3P56589 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.41■□□□□ 0.7
PEX3P56589 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.41■□□□□ 0.7
PEX3P56589 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.41■□□□□ 0.7
PEX3P56589 MTDHP3-201ENST00000594186 672 ntBASIC19.41■□□□□ 0.7
PEX3P56589 AC008608.2-201ENST00000606089 416 ntBASIC19.41■□□□□ 0.7
PEX3P56589 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 LINC01451-201ENST00000623792 534 ntBASIC19.41■□□□□ 0.7
PEX3P56589 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.41■□□□□ 0.7
PEX3P56589 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.41■□□□□ 0.7
PEX3P56589 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PEX3P56589 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.41■□□□□ 0.7
PEX3P56589 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX3P56589 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms