Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.24■■□□□ 1.15
COL15A1P39059 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 AL354751.1-201ENST00000412768 1863 ntBASIC22.24■■□□□ 1.15
COL15A1P39059 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 REXO1L9P-201ENST00000604264 2108 ntBASIC22.24■■□□□ 1.15
COL15A1P39059 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.24■■□□□ 1.15
COL15A1P39059 AL645939.2-201ENST00000427340 991 ntBASIC22.24■■□□□ 1.15
COL15A1P39059 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 AC096734.2-201ENST00000562054 433 ntBASIC22.24■■□□□ 1.15
COL15A1P39059 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC22.24■■□□□ 1.15
COL15A1P39059 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.24■■□□□ 1.15
COL15A1P39059 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.24■■□□□ 1.15
COL15A1P39059 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.24■■□□□ 1.15
COL15A1P39059 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
COL15A1P39059 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.23■■□□□ 1.15
COL15A1P39059 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.23■■□□□ 1.15
COL15A1P39059 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.23■■□□□ 1.15
COL15A1P39059 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COL15A1P39059 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
COL15A1P39059 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
COL15A1P39059 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 RHOQP3-201ENST00000437982 621 ntBASIC22.23■■□□□ 1.15
COL15A1P39059 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COL15A1P39059 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
COL15A1P39059 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL15A1P39059 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.23■■□□□ 1.15
COL15A1P39059 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.23■■□□□ 1.15
COL15A1P39059 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
COL15A1P39059 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.23■■□□□ 1.15
COL15A1P39059 MIR3197-201ENST00000582241 73 ntBASIC22.23■■□□□ 1.15
COL15A1P39059 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.23■■□□□ 1.15
COL15A1P39059 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.23■■□□□ 1.15
COL15A1P39059 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.23■■□□□ 1.15
COL15A1P39059 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.23■■□□□ 1.15
COL15A1P39059 AC009949.1-201ENST00000623048 1830 ntBASIC22.23■■□□□ 1.15
COL15A1P39059 ABALON-201ENST00000629058 1903 ntBASIC22.23■■□□□ 1.15
COL15A1P39059 BX276092.7-203ENST00000637198 1536 ntBASIC22.23■■□□□ 1.15
COL15A1P39059 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
COL15A1P39059 AC097637.2-201ENST00000624096 1997 ntBASIC22.22■■□□□ 1.15
COL15A1P39059 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.22■■□□□ 1.15
COL15A1P39059 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL15A1P39059 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL15A1P39059 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.22■■□□□ 1.15
COL15A1P39059 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL15A1P39059 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL15A1P39059 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL15A1P39059 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
COL15A1P39059 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL15A1P39059 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.22■■□□□ 1.15
COL15A1P39059 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.22■■□□□ 1.15
COL15A1P39059 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.22■■□□□ 1.15
COL15A1P39059 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.22■■□□□ 1.15
COL15A1P39059 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL15A1P39059 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL15A1P39059 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COL15A1P39059 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.21■■□□□ 1.15
COL15A1P39059 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.21■■□□□ 1.15
COL15A1P39059 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COL15A1P39059 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.21■■□□□ 1.15
COL15A1P39059 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.21■■□□□ 1.15
COL15A1P39059 FAM58CP-201ENST00000435741 640 ntBASIC22.21■■□□□ 1.15
COL15A1P39059 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.21■■□□□ 1.15
COL15A1P39059 SMN2-210ENST00000511812 867 ntTSL 2 BASIC22.21■■□□□ 1.15
COL15A1P39059 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.21■■□□□ 1.15
COL15A1P39059 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.21■■□□□ 1.15
COL15A1P39059 AC106028.4-201ENST00000614509 607 ntBASIC22.21■■□□□ 1.15
COL15A1P39059 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL15A1P39059 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.21■■□□□ 1.15
COL15A1P39059 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.15
COL15A1P39059 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.2■■□□□ 1.14
COL15A1P39059 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
COL15A1P39059 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
COL15A1P39059 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COL15A1P39059 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
COL15A1P39059 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COL15A1P39059 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms