Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MMP2P08253 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP2P08253 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MMP2P08253 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MMP2P08253 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP2P08253 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 KRT18P31-201ENST00000506277 1292 ntBASIC17.73■□□□□ 0.43
MMP2P08253 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
MMP2P08253 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.73■□□□□ 0.43
MMP2P08253 AL732292.2-201ENST00000609649 430 ntBASIC17.73■□□□□ 0.43
MMP2P08253 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
MMP2P08253 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MMP2P08253 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.72■□□□□ 0.43
MMP2P08253 MYCLP1-201ENST00000372451 1075 ntBASIC17.72■□□□□ 0.43
MMP2P08253 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP2P08253 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 AC132008.2-207ENST00000454517 770 ntBASIC17.72■□□□□ 0.43
MMP2P08253 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.72■□□□□ 0.43
MMP2P08253 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP2P08253 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.72■□□□□ 0.43
MMP2P08253 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP2P08253 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP2P08253 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP2P08253 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.72■□□□□ 0.43
MMP2P08253 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP2P08253 AC108860.2-201ENST00000562760 2183 ntBASIC17.72■□□□□ 0.43
MMP2P08253 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP2P08253 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MMP2P08253 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP2P08253 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP2P08253 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP2P08253 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP2P08253 ABCD1P5-201ENST00000445663 754 ntBASIC17.71■□□□□ 0.43
MMP2P08253 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.71■□□□□ 0.43
MMP2P08253 PRELID1P1-202ENST00000567272 903 ntBASIC17.71■□□□□ 0.43
MMP2P08253 AC111152.3-201ENST00000569699 673 ntBASIC17.71■□□□□ 0.43
MMP2P08253 AP001269.4-201ENST00000609611 512 ntBASIC17.71■□□□□ 0.43
MMP2P08253 AC073592.5-201ENST00000624854 528 ntBASIC17.71■□□□□ 0.43
MMP2P08253 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MMP2P08253 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
MMP2P08253 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP2P08253 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP2P08253 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP2P08253 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP2P08253 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP2P08253 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MMP2P08253 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP2P08253 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP2P08253 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP2P08253 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP2P08253 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP2P08253 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.7■□□□□ 0.42
MMP2P08253 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP2P08253 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms