Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT3O75175 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 OR6D1P-203ENST00000641209 4860 ntBASIC17.15■□□□□ 0.34
CNOT3O75175 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 MST1L-201ENST00000442552 2185 ntBASIC17.15■□□□□ 0.34
CNOT3O75175 LINC00167-201ENST00000530583 1419 ntBASIC17.15■□□□□ 0.34
CNOT3O75175 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.15■□□□□ 0.34
CNOT3O75175 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CNOT3O75175 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 RN7SL510P-201ENST00000581311 263 ntBASIC17.15■□□□□ 0.34
CNOT3O75175 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.15■□□□□ 0.34
CNOT3O75175 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.15■□□□□ 0.34
CNOT3O75175 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CNOT3O75175 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.15■□□□□ 0.34
CNOT3O75175 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
CNOT3O75175 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT3O75175 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
CNOT3O75175 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CNOT3O75175 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 AC008764.6-201ENST00000595909 2069 ntBASIC17.14■□□□□ 0.33
CNOT3O75175 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CNOT3O75175 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 TSPY19P-201ENST00000418461 509 ntBASIC17.14■□□□□ 0.33
CNOT3O75175 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNOT3O75175 TPM4P1-201ENST00000436100 807 ntBASIC17.14■□□□□ 0.33
CNOT3O75175 TSPY18P-201ENST00000441642 509 ntBASIC17.14■□□□□ 0.33
CNOT3O75175 FOSL1P1-201ENST00000511041 816 ntBASIC17.14■□□□□ 0.33
CNOT3O75175 AC074051.2-201ENST00000565115 352 ntBASIC17.14■□□□□ 0.33
CNOT3O75175 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.14■□□□□ 0.33
CNOT3O75175 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CNOT3O75175 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.14■□□□□ 0.33
CNOT3O75175 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.14■□□□□ 0.33
CNOT3O75175 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNOT3O75175 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.14■□□□□ 0.33
CNOT3O75175 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CNOT3O75175 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CNOT3O75175 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.14■□□□□ 0.33
CNOT3O75175 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.14■□□□□ 0.33
CNOT3O75175 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT3O75175 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT3O75175 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT3O75175 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.13■□□□□ 0.33
CNOT3O75175 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 AC026396.1-201ENST00000419388 421 ntBASIC17.13■□□□□ 0.33
CNOT3O75175 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
CNOT3O75175 IGHV3-47-201ENST00000425060 335 ntBASIC17.13■□□□□ 0.33
CNOT3O75175 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CNOT3O75175 GUSBP12-201ENST00000513727 720 ntBASIC17.13■□□□□ 0.33
CNOT3O75175 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CNOT3O75175 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms