Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.77■□□□□ 0.44
FOXD2O60548 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
FOXD2O60548 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
FOXD2O60548 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXD2O60548 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXD2O60548 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.77■□□□□ 0.43
FOXD2O60548 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXD2O60548 BICD1-207ENST00000551848 1962 ntBASIC17.77■□□□□ 0.43
FOXD2O60548 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXD2O60548 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
FOXD2O60548 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
FOXD2O60548 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
FOXD2O60548 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 AC125634.1-201ENST00000438758 1403 ntBASIC17.76■□□□□ 0.43
FOXD2O60548 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXD2O60548 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 WIZP1-201ENST00000531444 2299 ntBASIC17.76■□□□□ 0.43
FOXD2O60548 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXD2O60548 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXD2O60548 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXD2O60548 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXD2O60548 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
FOXD2O60548 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXD2O60548 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 AC006557.2-201ENST00000592985 1240 ntBASIC17.76■□□□□ 0.43
FOXD2O60548 AC064836.3-201ENST00000607928 673 ntBASIC17.76■□□□□ 0.43
FOXD2O60548 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXD2O60548 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXD2O60548 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXD2O60548 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXD2O60548 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXD2O60548 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXD2O60548 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXD2O60548 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXD2O60548 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
FOXD2O60548 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 MKNK2P1-201ENST00000437526 628 ntBASIC17.75■□□□□ 0.43
FOXD2O60548 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXD2O60548 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXD2O60548 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.75■□□□□ 0.43
FOXD2O60548 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXD2O60548 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXD2O60548 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXD2O60548 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXD2O60548 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXD2O60548 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXD2O60548 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXD2O60548 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXD2O60548 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXD2O60548 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
FOXD2O60548 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
FOXD2O60548 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
FOXD2O60548 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXD2O60548 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
FOXD2O60548 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 AL035633.1-201ENST00000406139 838 ntBASIC17.74■□□□□ 0.43
FOXD2O60548 CNN2P11-201ENST00000429351 262 ntBASIC17.74■□□□□ 0.43
FOXD2O60548 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXD2O60548 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms