Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 UBALD1-205ENST00000590891 2641 ntBASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 AC016396.2-201ENST00000562575 1417 ntBASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM49D1C9J1S8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 AGGF1P2-201ENST00000426656 2106 ntBASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 AP000523.1-201ENST00000398242 1049 ntBASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 ECEL1P3-201ENST00000427961 737 ntBASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 KRT89P-201ENST00000620027 1478 ntBASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM49D1C9J1S8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM49D1C9J1S8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM49D1C9J1S8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM49D1C9J1S8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM49D1C9J1S8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM49D1C9J1S8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM49D1C9J1S8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms