Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 AL137013.1-201ENST00000432946 1228 ntBASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 AC092597.1-201ENST00000487352 616 ntBASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 AC005363.2-201ENST00000618631 242 ntBASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 LINC01451-201ENST00000623792 534 ntBASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPSF4LA6NMK7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 TERF1P1-201ENST00000311003 1181 ntBASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 STARP1-201ENST00000397973 869 ntBASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 FAM8A6P-201ENST00000407496 1135 ntBASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 AC113347.1-201ENST00000413321 391 ntBASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 HLA-F-220ENST00000434407 884 ntBASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 YBX1P2-201ENST00000489612 999 ntBASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 AC009154.2-201ENST00000621177 724 ntBASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPSF4LA6NMK7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPSF4LA6NMK7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms