Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 AL662844.1-201ENST00000546340 181 ntBASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 AL592071.1-201ENST00000611956 408 ntBASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 AC093010.1-201ENST00000473625 1624 ntBASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 LINC01126-201ENST00000623515 1646 ntBASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 EMBP1-201ENST00000458200 901 ntBASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 KRT18P55-202ENST00000578578 1546 ntBASIC17.88■□□□□ 0.45
NCKIPSDQ9NZQ3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 KRT16P4-201ENST00000453883 522 ntBASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 AC099336.1-202ENST00000602961 463 ntBASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 AC124864.1-201ENST00000623408 392 ntBASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 AL353692.3-201ENST00000407031 1396 ntBASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 AC006116.8-202ENST00000587620 1550 ntBASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKIPSDQ9NZQ3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms