Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 LINC01922-201ENST00000562582 719 ntBASIC20.56■□□□□ 0.88
RNF216Q9NWF9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AC083849.1-201ENST00000615227 514 ntBASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AC006333.2-201ENST00000607957 2099 ntBASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 AC005261.6-201ENST00000623072 1387 ntBASIC20.56■□□□□ 0.88
RNF216Q9NWF9 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AL390961.4-201ENST00000623958 2535 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 MTND1P34-201ENST00000438556 671 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 Z83846.1-201ENST00000446798 265 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AC010486.3-201ENST00000511602 785 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AC137549.1-201ENST00000514243 533 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 LDHBP3-201ENST00000514909 822 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AC139103.1-201ENST00000534696 1030 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 Metazoa_SRP.26-201ENST00000547793 284 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 AL391597.1-201ENST00000618707 694 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 HYMAI.1-201ENST00000620949 238 ntBASIC20.55■□□□□ 0.88
RNF216Q9NWF9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF216Q9NWF9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.54■□□□□ 0.88
RNF216Q9NWF9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 PTCD2P2-201ENST00000415579 1095 ntBASIC20.54■□□□□ 0.88
RNF216Q9NWF9 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 UBE2V2P4-201ENST00000447495 259 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms